Merge branch 'master' of pwning.de:/hgraph
This commit is contained in:
commit
b75f378a67
18
dist/build/autogen/Paths_hgraph.hs
vendored
18
dist/build/autogen/Paths_hgraph.hs
vendored
@ -1,30 +1,34 @@
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module Paths_hgraph (
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version,
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getBinDir, getLibDir, getDataDir, getLibexecDir,
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getDataFileName
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getDataFileName, getSysconfDir
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) where
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import qualified Control.Exception as Exception
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import Data.Version (Version(..))
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import System.Environment (getEnv)
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import Prelude
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catchIO :: IO a -> (Exception.IOException -> IO a) -> IO a
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catchIO = Exception.catch
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version :: Version
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version = Version {versionBranch = [0,0,1], versionTags = []}
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bindir, libdir, datadir, libexecdir :: FilePath
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bindir, libdir, datadir, libexecdir, sysconfdir :: FilePath
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bindir = "/homes/sdressel/.cabal/bin"
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libdir = "/homes/sdressel/.cabal/lib/hgraph-0.0.1/ghc-7.4.1"
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datadir = "/homes/sdressel/.cabal/share/hgraph-0.0.1"
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libexecdir = "/homes/sdressel/.cabal/libexec"
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bindir = "/home/sdressel/.cabal/bin"
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libdir = "/home/sdressel/.cabal/lib/x86_64-linux-ghc-7.6.3/hgraph-0.0.1"
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datadir = "/home/sdressel/.cabal/share/x86_64-linux-ghc-7.6.3/hgraph-0.0.1"
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libexecdir = "/home/sdressel/.cabal/libexec"
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sysconfdir = "/home/sdressel/.cabal/etc"
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getBinDir, getLibDir, getDataDir, getLibexecDir :: IO FilePath
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getBinDir, getLibDir, getDataDir, getLibexecDir, getSysconfDir :: IO FilePath
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getBinDir = catchIO (getEnv "hgraph_bindir") (\_ -> return bindir)
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getLibDir = catchIO (getEnv "hgraph_libdir") (\_ -> return libdir)
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getDataDir = catchIO (getEnv "hgraph_datadir") (\_ -> return datadir)
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getLibexecDir = catchIO (getEnv "hgraph_libexecdir") (\_ -> return libexecdir)
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getSysconfDir = catchIO (getEnv "hgraph_sysconfdir") (\_ -> return sysconfdir)
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getDataFileName :: FilePath -> IO FilePath
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getDataFileName name = do
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54
dist/build/autogen/cabal_macros.h
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54
dist/build/autogen/cabal_macros.h
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@ -1,11 +1,11 @@
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/* DO NOT EDIT: This file is automatically generated by Cabal */
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/* package QuickCheck-2.4.2 */
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#define VERSION_QuickCheck "2.4.2"
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/* package QuickCheck-2.6 */
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#define VERSION_QuickCheck "2.6"
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#define MIN_VERSION_QuickCheck(major1,major2,minor) (\
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(major1) < 2 || \
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(major1) == 2 && (major2) < 4 || \
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(major1) == 2 && (major2) == 4 && (minor) <= 2)
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(major1) == 2 && (major2) < 6 || \
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(major1) == 2 && (major2) == 6 && (minor) <= 0)
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/* package Stream-0.4.6.1 */
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#define VERSION_Stream "0.4.6.1"
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@ -14,40 +14,40 @@
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(major1) == 0 && (major2) < 4 || \
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(major1) == 0 && (major2) == 4 && (minor) <= 6)
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/* package accelerate-0.13.0.5 */
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#define VERSION_accelerate "0.13.0.5"
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/* package accelerate-0.14.0.0 */
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#define VERSION_accelerate "0.14.0.0"
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#define MIN_VERSION_accelerate(major1,major2,minor) (\
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(major1) < 0 || \
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(major1) == 0 && (major2) < 13 || \
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(major1) == 0 && (major2) == 13 && (minor) <= 0)
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(major1) == 0 && (major2) < 14 || \
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(major1) == 0 && (major2) == 14 && (minor) <= 0)
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/* package base-4.5.0.0 */
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#define VERSION_base "4.5.0.0"
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/* package base-4.6.0.1 */
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#define VERSION_base "4.6.0.1"
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#define MIN_VERSION_base(major1,major2,minor) (\
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(major1) < 4 || \
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(major1) == 4 && (major2) < 5 || \
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(major1) == 4 && (major2) == 5 && (minor) <= 0)
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(major1) == 4 && (major2) < 6 || \
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(major1) == 4 && (major2) == 6 && (minor) <= 0)
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/* package bytestring-0.9.2.1 */
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#define VERSION_bytestring "0.9.2.1"
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/* package bytestring-0.10.0.2 */
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#define VERSION_bytestring "0.10.0.2"
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#define MIN_VERSION_bytestring(major1,major2,minor) (\
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(major1) < 0 || \
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(major1) == 0 && (major2) < 9 || \
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(major1) == 0 && (major2) == 9 && (minor) <= 2)
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(major1) == 0 && (major2) < 10 || \
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(major1) == 0 && (major2) == 10 && (minor) <= 0)
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/* package deepseq-1.3.0.0 */
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#define VERSION_deepseq "1.3.0.0"
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/* package deepseq-1.3.0.1 */
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#define VERSION_deepseq "1.3.0.1"
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#define MIN_VERSION_deepseq(major1,major2,minor) (\
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(major1) < 1 || \
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(major1) == 1 && (major2) < 3 || \
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(major1) == 1 && (major2) == 3 && (minor) <= 0)
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/* package ghc-7.4.1 */
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#define VERSION_ghc "7.4.1"
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/* package ghc-7.6.3 */
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#define VERSION_ghc "7.6.3"
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#define MIN_VERSION_ghc(major1,major2,minor) (\
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(major1) < 7 || \
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(major1) == 7 && (major2) < 4 || \
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(major1) == 7 && (major2) == 4 && (minor) <= 1)
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(major1) == 7 && (major2) < 6 || \
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(major1) == 7 && (major2) == 6 && (minor) <= 3)
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/* package monad-par-0.3.4.5 */
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#define VERSION_monad_par "0.3.4.5"
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@ -56,17 +56,17 @@
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(major1) == 0 && (major2) < 3 || \
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(major1) == 0 && (major2) == 3 && (minor) <= 4)
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/* package parallel-3.2.0.2 */
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#define VERSION_parallel "3.2.0.2"
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/* package parallel-3.2.0.4 */
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#define VERSION_parallel "3.2.0.4"
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#define MIN_VERSION_parallel(major1,major2,minor) (\
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(major1) < 3 || \
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(major1) == 3 && (major2) < 2 || \
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(major1) == 3 && (major2) == 2 && (minor) <= 0)
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/* package text-0.11.1.13 */
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#define VERSION_text "0.11.1.13"
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/* package text-0.11.3.1 */
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#define VERSION_text "0.11.3.1"
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#define MIN_VERSION_text(major1,major2,minor) (\
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(major1) < 0 || \
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(major1) == 0 && (major2) < 11 || \
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(major1) == 0 && (major2) == 11 && (minor) <= 1)
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(major1) == 0 && (major2) == 11 && (minor) <= 3)
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BIN
dist/build/hgraph/hgraph
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BIN
dist/build/hgraph/hgraph
vendored
Binary file not shown.
56
src/Main.hs
56
src/Main.hs
@ -33,7 +33,7 @@ import Debug.Trace
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import qualified Data.Text as T
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import Data.Text.Encoding
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--import Stream hiding (map) --same as Data.Stream imported above?
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import Data.Array.Accelerate hiding (not)
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import Data.Array.Accelerate hiding (not,(++))
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-- change to Data.Array.Accelerate.CUDA as I and link accelerate-cuda to use GPU instead of CPU
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-- depends on accelerate-cuda package in cabal, which needs the installed CUDA-stuff form
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-- nVidia (nvcc, header-files, ...) and the propriatary driver
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@ -88,16 +88,30 @@ createGraph input = createGraph' input (Left [])
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createGraph' a r
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| T.null a = r
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| otherwise =
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let next = (createGraph' (T.tail a) r) in
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let next = (createGraph' (T.tail a) r) in -- flip cases for less function-calls?
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case next of
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Left xs ->
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case T.head (traceEvent "parsing" a) of
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'0' -> Left $ traceEvent "parse-concat" 0:xs
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'1' -> Left $ traceEvent "parse-concat" 1:xs
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case T.head a of
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'0' -> Left $ 0:xs
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'1' -> Left $ 1:xs
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_ -> Right $ T.append (T.pack "cannot parse ") a
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Right errstr ->
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Right errstr
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createAttr :: T.Text -> Either [Double] T.Text
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createAttr input = createAttr' (T.split (=='\t') input) (Left [])
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where
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createAttr' :: [T.Text] -> Either [Double] T.Text -> Either [Double] T.Text
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createAttr' (a:as) r =
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let this = read (T.unpack a) :: Double in
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case isNaN this of
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True -> Right $ T.append (T.pack "cannot parse ") a
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_ ->
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let next = (createAttr' as r) in
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case next of
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Left rs -> Left (this:rs)
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_ -> next
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emptyLine :: T.Text -> Bool
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emptyLine a
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| T.null a = True
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@ -109,7 +123,7 @@ emptyLog a = False --emptyLine $ foldl True (&&) (map emptyLine a)
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-- TODO: implement calculation
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--doCalculation :: Matrix Int -> B.ByteString
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doCalculation a = B.pack $ (show a) ++ "\n"
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doCalculation a = B.pack $ ""--(show a) ++ "\n"
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createOutput :: [[Int]] -> B.ByteString
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@ -124,6 +138,7 @@ createOutput' (a:as) = T.append
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(T.singleton '\n'))
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(createOutput' as)
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-- preprocess ::
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showHelp = undefined
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@ -144,29 +159,42 @@ exeMain = do
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adjMat <- return $ L.filter (not . emptyLine) (T.lines (decodeUtf8 (head input)))
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attrMat <- return $ L.filter (not . emptyLine) (T.lines (decodeUtf8 ((head . L.tail) input)))
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inputLines <- return $ length adjMat
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adjLines <- return $ length adjMat
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attrLines <- return $ length attrMat
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-- TODO: concat with foldl1' kills us later -> use presized/preallocated array so we
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-- dont copy that much lateron. Best would be Matrix Int
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-- unrefined_graph::[Either [Int] String] - [Int] is Adjacency-Line, String is parse-Error
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unrefined_graph <- return $ (L.map (traceEvent "mapping" . createGraph) adjMat)
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unrefined_graph <- return $ (L.map (createGraph) adjMat)
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+|| (parBuffer 100 rdeepseq) --run parallel, evaluate fully
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unrefined_attr <- return $ (L.map (createAttr) attrMat)
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+|| (parBuffer 100 rdeepseq) --run parallel, evaluate fully
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--egraph <- return $ graphFolder unrefined_graph
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(graph, log, lines) <- return $ ((L.foldl1' ((traceEvent "concatenating graph") . (++)) (lefts unrefined_graph), -- concatenated graph
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traceEvent "concatenating log" T.intercalate (T.singleton '\n') (rights unrefined_graph), -- concat error-log
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traceEvent "getting length" length unrefined_graph) -- number of elements in graph
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(graph, log, lines) <- return $ ((L.foldl1' (++) (lefts unrefined_graph), -- concatenated graph
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T.intercalate (T.singleton '\n') (rights unrefined_graph), -- concat error-log
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length unrefined_graph) -- number of elements in graph
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-- in parallel
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`using` parTuple3 rseq rseq rseq)
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`using` parTuple3 rdeepseq rdeepseq rseq)
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(attr, log, linesAttr) <- return $ ((L.foldl1' (++) (lefts unrefined_graph), -- concatenated graph
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T.append log (T.intercalate (T.singleton '\n') (rights unrefined_graph)), -- concat error-log
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length unrefined_graph) -- number of elements in graph
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-- in parallel
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`using` parTuple3 rdeepseq rdeepseq rseq)
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-- validate graph
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log <- return $ let l = traceEvent "first validation" length graph in
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log <- return $ let l = length graph in
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if l /= lines*lines then
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T.append log $ T.pack $ "Lines dont match up. Read " ++ (show l) ++
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" chars. Expected " ++ (show (lines*lines)) ++
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" chars.\n"
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else if adjLines /= attrLines then
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T.append log $ T.pack $ "Adjecency-Matrix size "++ (show adjLines) ++
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" differs from Attribute-Matrix " ++ (show attrLines) ++
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".\n"
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else
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log
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output <- return $ case emptyLine (traceEvent "last validation" log) of
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output <- return $ case emptyLine log of
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True -> doCalculation $ graph --A.fromList (A.Z A.:. lines A.:. lines) graph
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_ -> encodeUtf8 $ T.append (T.append (T.pack "Error detected:\n") log) (T.pack "\n\n")
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B.putStr output
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